STORMM Source Documentation
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Here is a list of all documented variables with links to the class documentation for each member:
- i -
i_at :
stormm::topology::ScreeningFactorTag
i_atom :
stormm::topology::AngleTerm< T >
,
stormm::topology::BondTerm< T >
,
stormm::topology::CharmmImprTerm< T >
,
stormm::topology::CmapTerm< T >
,
stormm::topology::DihedralTerm< T >
,
stormm::topology::UreyBradleyTerm< T >
idata :
stormm::energy::PMIGridAccumulator
,
stormm::energy::PMIGridFPReader
igb :
stormm::energy::ImplicitSolventKit< T >
,
stormm::energy::ImplicitSolventRecipe< T >
,
stormm::energy::SyNonbondedKit< T, T2 >
,
stormm::mm::ImplicitSolventKit< T >
,
stormm::mm::SyNonbondedKit< T, T2 >
,
stormm::structure::SyNonbondedKit< T, T2 >
,
stormm::synthesis::ImplicitSolventKit< T >
,
stormm::synthesis::SyNonbondedKit< T, T2 >
,
stormm::topology::ImplicitSolventKit< T >
,
stormm::trajectory::SyNonbondedKit< T, T2 >
image :
stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
image_alt :
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
img_atom_chn_cell :
stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
img_atom_chn_cell_alt :
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
img_atom_idx :
stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
img_atom_idx_alt :
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
index :
stormm::chemistry::CoupledEdit
,
stormm::synthesis::CoupledEdit
index_bound :
stormm::energy::LogSplineTable< T4 >
,
stormm::energy::PPIeKit< T >
,
stormm::energy::PPIKit< T, T4 >
,
stormm::stmath::LogSplineTable< T4 >
index_shift_bits :
stormm::energy::PPIeKit< T >
,
stormm::energy::PPIKit< T, T4 >
infr14_acc :
stormm::energy::SyValenceKit< T >
,
stormm::mm::SyValenceKit< T >
,
stormm::structure::SyValenceKit< T >
,
stormm::synthesis::SyValenceKit< T >
,
stormm::trajectory::SyValenceKit< T >
infr14_i_atoms :
stormm::chemistry::ValenceKit< T >
,
stormm::energy::ValenceKit< T >
,
stormm::mm::ValenceKit< T >
,
stormm::restraints::ValenceKit< T >
,
stormm::review::ValenceKit< T >
,
stormm::structure::ValenceKit< T >
,
stormm::synthesis::ValenceKit< T >
,
stormm::topology::ValenceKit< T >
infr14_insr :
stormm::energy::SyValenceKit< T >
,
stormm::mm::SyValenceKit< T >
,
stormm::structure::SyValenceKit< T >
,
stormm::synthesis::SyValenceKit< T >
,
stormm::trajectory::SyValenceKit< T >
infr14_l_atoms :
stormm::chemistry::ValenceKit< T >
,
stormm::energy::ValenceKit< T >
,
stormm::mm::ValenceKit< T >
,
stormm::restraints::ValenceKit< T >
,
stormm::review::ValenceKit< T >
,
stormm::structure::ValenceKit< T >
,
stormm::synthesis::ValenceKit< T >
,
stormm::topology::ValenceKit< T >
infr14_param_idx :
stormm::chemistry::ValenceKit< T >
,
stormm::energy::ValenceKit< T >
,
stormm::mm::ValenceKit< T >
,
stormm::restraints::ValenceKit< T >
,
stormm::review::ValenceKit< T >
,
stormm::structure::ValenceKit< T >
,
stormm::synthesis::ValenceKit< T >
,
stormm::topology::ValenceKit< T >
init_evolution :
stormm::energy::ThermostatWriter< T >
,
stormm::mm::ThermostatReader< T >
,
stormm::mm::ThermostatWriter< T >
,
stormm::trajectory::ThermostatReader< T >
,
stormm::trajectory::ThermostatWriter< T >
init_temperature :
stormm::energy::ThermostatWriter< T >
,
stormm::mm::ThermostatReader< T >
,
stormm::mm::ThermostatWriter< T >
,
stormm::trajectory::ThermostatReader< T >
,
stormm::trajectory::ThermostatWriter< T >
init_temperatures :
stormm::energy::ThermostatWriter< T >
,
stormm::mm::ThermostatReader< T >
,
stormm::mm::ThermostatWriter< T >
,
stormm::trajectory::ThermostatReader< T >
,
stormm::trajectory::ThermostatWriter< T >
initial_step :
stormm::energy::MMControlKit< T >
,
stormm::mm::MMControlKit< T >
,
stormm::stmath::MMControlKit< T >
,
stormm::trajectory::MMControlKit< T >
inrt :
stormm::trajectory::MotionSweepReader
,
stormm::trajectory::MotionSweepWriter
inrt_nxt :
stormm::trajectory::MotionSweepReader
,
stormm::trajectory::MotionSweepWriter
inrt_nxt_ovrf :
stormm::trajectory::MotionSweepReader
,
stormm::trajectory::MotionSweepWriter
inrt_ovrf :
stormm::trajectory::MotionSweepReader
,
stormm::trajectory::MotionSweepWriter
inrt_scale :
stormm::trajectory::MotionSweepReader
,
stormm::trajectory::MotionSweepWriter
instantaneous_accumulators :
stormm::energy::ScoreCardReader
,
stormm::energy::ScoreCardWriter
,
stormm::mm::ScoreCardWriter
int_id :
stormm::trajectory::ValidCoordinateTypes
inv_fp_scale :
stormm::energy::ISWorkspaceKit< T >
,
stormm::mm::ISWorkspaceKit< T >
,
stormm::synthesis::ISWorkspaceKit< T >
inv_fp_scaling :
stormm::stmath::GenericRdSubstrate< T >
inv_frc_scale :
stormm::chemistry::PsSynthesisReader
,
stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::energy::PsSynthesisReader
,
stormm::energy::PsSynthesisWriter
,
stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::mm::PsSynthesisReader
,
stormm::mm::PsSynthesisWriter
,
stormm::stmath::ConjGradSubstrate
,
stormm::stmath::PsSynthesisWriter
,
stormm::structure::PsSynthesisReader
,
stormm::structure::PsSynthesisWriter
,
stormm::synthesis::PsSynthesisReader
,
stormm::synthesis::PsSynthesisWriter
,
stormm::testing::PsSynthesisWriter
,
stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::trajectory::PsSynthesisReader
,
stormm::trajectory::PsSynthesisWriter
inv_gpos_scale :
stormm::chemistry::CoordinateSeriesReader< T >
,
stormm::chemistry::PsSynthesisReader
,
stormm::energy::CoordinateSeriesReader< T >
,
stormm::energy::CoordinateSeriesWriter< T >
,
stormm::energy::PsSynthesisReader
,
stormm::energy::PsSynthesisWriter
,
stormm::mm::PsSynthesisReader
,
stormm::mm::PsSynthesisWriter
,
stormm::review::CoordinateSeriesReader< T >
,
stormm::stmath::PsSynthesisWriter
,
stormm::structure::CoordinateSeriesReader< T >
,
stormm::structure::CoordinateSeriesWriter< T >
,
stormm::structure::PsSynthesisReader
,
stormm::structure::PsSynthesisWriter
,
stormm::synthesis::CoordinateSeriesReader< T >
,
stormm::synthesis::CoordinateSeriesWriter< T >
,
stormm::synthesis::PsSynthesisReader
,
stormm::synthesis::PsSynthesisWriter
,
stormm::testing::CoordinateSeriesWriter< T >
,
stormm::testing::PsSynthesisWriter
,
stormm::trajectory::CoordinateSeriesReader< T >
,
stormm::trajectory::CoordinateSeriesWriter< T >
,
stormm::trajectory::PsSynthesisReader
,
stormm::trajectory::PsSynthesisWriter
inv_grp_atoms :
stormm::synthesis::SyPermutorKit< T >
inv_grp_bounds :
stormm::synthesis::SyPermutorKit< T >
inv_lpos_scale :
stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >
,
stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
,
stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
inv_masses :
stormm::chemistry::ChemicalDetailsKit
,
stormm::energy::ChemicalDetailsKit
,
stormm::energy::SyAtomUpdateKit< T, T2, T4 >
,
stormm::mm::ChemicalDetailsKit
,
stormm::mm::SyAtomUpdateKit< T, T2, T4 >
,
stormm::restraints::ChemicalDetailsKit
,
stormm::review::ChemicalDetailsKit
,
stormm::structure::ChemicalDetailsKit
,
stormm::structure::SyAtomUpdateKit< T, T2, T4 >
,
stormm::synthesis::ChemicalDetailsKit
,
stormm::synthesis::SyAtomUpdateKit< T, T2, T4 >
,
stormm::topology::ChemicalDetailsKit
,
stormm::trajectory::ChemicalDetailsKit
,
stormm::trajectory::SyAtomUpdateKit< T, T2, T4 >
inv_scale :
stormm::review::MeshParamKit
,
stormm::structure::MeshParamKit
inv_scale_f :
stormm::review::MeshParamKit
,
stormm::structure::MeshParamKit
inv_vel_scale :
stormm::chemistry::PsSynthesisReader
,
stormm::energy::PsSynthesisReader
,
stormm::energy::PsSynthesisWriter
,
stormm::mm::PsSynthesisReader
,
stormm::mm::PsSynthesisWriter
,
stormm::stmath::PsSynthesisWriter
,
stormm::structure::PsSynthesisReader
,
stormm::structure::PsSynthesisWriter
,
stormm::synthesis::PsSynthesisReader
,
stormm::synthesis::PsSynthesisWriter
,
stormm::testing::PsSynthesisWriter
,
stormm::trajectory::PsSynthesisReader
,
stormm::trajectory::PsSynthesisWriter
inverse_nrg_scale_f :
stormm::energy::ScoreCardReader
,
stormm::energy::ScoreCardWriter
,
stormm::mm::ScoreCardWriter
inverse_nrg_scale_lf :
stormm::energy::ScoreCardReader
,
stormm::energy::ScoreCardWriter
,
stormm::mm::ScoreCardWriter
invertible_group_bounds :
stormm::chemistry::ChemicalFeaturesReader
,
stormm::structure::ChemicalFeaturesReader
invertible_groups :
stormm::chemistry::ChemicalFeaturesReader
,
stormm::structure::ChemicalFeaturesReader
invu :
stormm::chemistry::CondensateReader
,
stormm::chemistry::CoordinateFrameReader
,
stormm::chemistry::CoordinateSeriesReader< T >
,
stormm::chemistry::PhaseSpaceReader
,
stormm::chemistry::PsSynthesisReader
,
stormm::diskutil::CoordinateFrameReader
,
stormm::energy::CoordinateFrameReader
,
stormm::energy::CoordinateFrameWriter
,
stormm::energy::CoordinateSeriesReader< T >
,
stormm::energy::CoordinateSeriesWriter< T >
,
stormm::energy::PhaseSpaceReader
,
stormm::energy::PhaseSpaceWriter
,
stormm::energy::PsSynthesisBorders
,
stormm::energy::PsSynthesisReader
,
stormm::energy::PsSynthesisWriter
,
stormm::mm::CoordinateFrameReader
,
stormm::mm::PhaseSpaceReader
,
stormm::mm::PhaseSpaceWriter
,
stormm::mm::PsSynthesisReader
,
stormm::mm::PsSynthesisWriter
,
stormm::namelist::CoordinateFrameReader
,
stormm::restraints::CoordinateFrameReader
,
stormm::review::CoordinateFrameReader
,
stormm::review::CoordinateSeriesReader< T >
,
stormm::review::MeshParamKit
,
stormm::stmath::PsSynthesisWriter
,
stormm::structure::CondensateReader
,
stormm::structure::CondensateWriter
,
stormm::structure::CoordinateFrameReader
,
stormm::structure::CoordinateFrameWriter
,
stormm::structure::CoordinateSeriesReader< T >
,
stormm::structure::CoordinateSeriesWriter< T >
,
stormm::structure::MeshParamKit
,
stormm::structure::PhaseSpaceReader
,
stormm::structure::PhaseSpaceWriter
,
stormm::structure::PsSynthesisReader
,
stormm::structure::PsSynthesisWriter
,
stormm::synthesis::CondensateReader
,
stormm::synthesis::CondensateWriter
,
stormm::synthesis::CoordinateFrameReader
,
stormm::synthesis::CoordinateFrameWriter
,
stormm::synthesis::CoordinateSeriesReader< T >
,
stormm::synthesis::CoordinateSeriesWriter< T >
,
stormm::synthesis::PhaseSpaceReader
,
stormm::synthesis::PhaseSpaceWriter
,
stormm::synthesis::PsSynthesisBorders
,
stormm::synthesis::PsSynthesisReader
,
stormm::synthesis::PsSynthesisWriter
,
stormm::testing::CoordinateSeriesWriter< T >
,
stormm::testing::PsSynthesisWriter
,
stormm::trajectory::CondensateReader
,
stormm::trajectory::CondensateWriter
,
stormm::trajectory::CoordinateFrameReader
,
stormm::trajectory::CoordinateFrameWriter
,
stormm::trajectory::CoordinateSeriesReader< T >
,
stormm::trajectory::CoordinateSeriesWriter< T >
,
stormm::trajectory::PhaseSpaceReader
,
stormm::trajectory::PhaseSpaceWriter
,
stormm::trajectory::PsSynthesisBorders
,
stormm::trajectory::PsSynthesisReader
,
stormm::trajectory::PsSynthesisWriter
invu_alt :
stormm::chemistry::PhaseSpaceReader
,
stormm::chemistry::PsSynthesisReader
,
stormm::energy::PhaseSpaceReader
,
stormm::energy::PhaseSpaceWriter
,
stormm::energy::PsSynthesisReader
,
stormm::energy::PsSynthesisWriter
,
stormm::mm::PhaseSpaceReader
,
stormm::mm::PhaseSpaceWriter
,
stormm::mm::PsSynthesisReader
,
stormm::mm::PsSynthesisWriter
,
stormm::stmath::PsSynthesisWriter
,
stormm::structure::PhaseSpaceReader
,
stormm::structure::PhaseSpaceWriter
,
stormm::structure::PsSynthesisReader
,
stormm::structure::PsSynthesisWriter
,
stormm::synthesis::PhaseSpaceReader
,
stormm::synthesis::PhaseSpaceWriter
,
stormm::synthesis::PsSynthesisReader
,
stormm::synthesis::PsSynthesisWriter
,
stormm::testing::PsSynthesisWriter
,
stormm::trajectory::PhaseSpaceReader
,
stormm::trajectory::PhaseSpaceWriter
,
stormm::trajectory::PsSynthesisReader
,
stormm::trajectory::PsSynthesisWriter
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