Here is a list of all documented class members with links to the class documentation for each member:

- i -

• i_at : stormm::topology::ScreeningFactorTag
• i_atom : stormm::topology::AngleTerm< T >, stormm::topology::BondTerm< T >, stormm::topology::CharmmImprTerm< T >, stormm::topology::CmapTerm< T >, stormm::topology::DihedralTerm< T >, stormm::topology::UreyBradleyTerm< T >
• idata : stormm::energy::PMIGridAccumulator, stormm::energy::PMIGridFPReader
• igb : stormm::energy::ImplicitSolventKit< T >, stormm::energy::ImplicitSolventRecipe< T >, stormm::energy::SyNonbondedKit< T, T2 >, stormm::mm::ImplicitSolventKit< T >, stormm::mm::SyNonbondedKit< T, T2 >, stormm::structure::SyNonbondedKit< T, T2 >, stormm::synthesis::ImplicitSolventKit< T >, stormm::synthesis::SyNonbondedKit< T, T2 >, stormm::topology::ImplicitSolventKit< T >, stormm::trajectory::SyNonbondedKit< T, T2 >
• image : stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
• image_alt : stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
• img_atom_chn_cell : stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
• img_atom_chn_cell_alt : stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
• img_atom_idx : stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
• img_atom_idx_alt : stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >
• impartControlData() : stormm::synthesis::SynthesisPermutor
• impartCoordinates() : stormm::structure::MdlMol, stormm::synthesis::MdlMol, stormm::testing::MdlMol, stormm::topology::MdlMol
• ImplicitSolventKit() : stormm::energy::ImplicitSolventKit< T >, stormm::mm::ImplicitSolventKit< T >, stormm::synthesis::ImplicitSolventKit< T >, stormm::topology::ImplicitSolventKit< T >
• ImplicitSolventRecipe() : stormm::energy::ImplicitSolventRecipe< T >
• ImplicitSolventWorkspace() : stormm::energy::ImplicitSolventWorkspace, stormm::mm::ImplicitSolventWorkspace, stormm::synthesis::ImplicitSolventWorkspace
• importCard() : stormm::energy::ScoreCard, stormm::mm::ScoreCard, stormm::review::ScoreCard, stormm::structure::ScoreCard, stormm::synthesis::ScoreCard
• importFrame() : stormm::chemistry::CoordinateSeries< T >, stormm::diskutil::CoordinateSeries< T >, stormm::energy::CoordinateSeries< T >, stormm::review::CoordinateSeries< T >, stormm::stmath::CoordinateSeries< T >, stormm::structure::CoordinateSeries< T >, stormm::synthesis::CoordinateSeries< T >, stormm::testing::CoordinateSeries< T >, stormm::trajectory::CoordinateSeries< T >
• importFromFile() : stormm::chemistry::CoordinateSeries< T >, stormm::diskutil::CoordinateSeries< T >, stormm::energy::CoordinateSeries< T >, stormm::review::CoordinateSeries< T >, stormm::stmath::CoordinateSeries< T >, stormm::structure::CoordinateSeries< T >, stormm::synthesis::CoordinateSeries< T >, stormm::testing::CoordinateSeries< T >, stormm::trajectory::CoordinateSeries< T >
• importSystem() : stormm::chemistry::PhaseSpaceSynthesis, stormm::diskutil::PhaseSpaceSynthesis, stormm::energy::PhaseSpaceSynthesis, stormm::mm::PhaseSpaceSynthesis, stormm::review::PhaseSpaceSynthesis, stormm::stmath::PhaseSpaceSynthesis, stormm::structure::PhaseSpaceSynthesis, stormm::synthesis::PhaseSpaceSynthesis, stormm::testing::PhaseSpaceSynthesis, stormm::trajectory::PhaseSpaceSynthesis
• incrementSampleCount() : stormm::energy::ScoreCard, stormm::mm::ScoreCard, stormm::review::ScoreCard, stormm::structure::ScoreCard, stormm::synthesis::ScoreCard
• incrementStep() : stormm::energy::MolecularMechanicsControls, stormm::energy::Thermostat, stormm::mm::MolecularMechanicsControls, stormm::mm::Thermostat, stormm::stmath::MolecularMechanicsControls, stormm::trajectory::MolecularMechanicsControls, stormm::trajectory::Thermostat
• index : stormm::chemistry::CoupledEdit, stormm::synthesis::CoupledEdit
• index_bound : stormm::energy::LogSplineTable< T4 >, stormm::energy::PPIeKit< T >, stormm::energy::PPIKit< T, T4 >, stormm::stmath::LogSplineTable< T4 >
• index_shift_bits : stormm::energy::PPIeKit< T >, stormm::energy::PPIKit< T, T4 >
• IndigoAtomCenter() : stormm::chemistry::IndigoAtomCenter
• IndigoFragment() : stormm::chemistry::IndigoFragment
• IndigoTable() : stormm::chemistry::IndigoTable
• infr14_acc : stormm::energy::SyValenceKit< T >, stormm::mm::SyValenceKit< T >, stormm::structure::SyValenceKit< T >, stormm::synthesis::SyValenceKit< T >, stormm::trajectory::SyValenceKit< T >
• infr14_i_atoms : stormm::chemistry::ValenceKit< T >, stormm::energy::ValenceKit< T >, stormm::mm::ValenceKit< T >, stormm::restraints::ValenceKit< T >, stormm::review::ValenceKit< T >, stormm::structure::ValenceKit< T >, stormm::synthesis::ValenceKit< T >, stormm::topology::ValenceKit< T >
• infr14_insr : stormm::energy::SyValenceKit< T >, stormm::mm::SyValenceKit< T >, stormm::structure::SyValenceKit< T >, stormm::synthesis::SyValenceKit< T >, stormm::trajectory::SyValenceKit< T >
• infr14_l_atoms : stormm::chemistry::ValenceKit< T >, stormm::energy::ValenceKit< T >, stormm::mm::ValenceKit< T >, stormm::restraints::ValenceKit< T >, stormm::review::ValenceKit< T >, stormm::structure::ValenceKit< T >, stormm::synthesis::ValenceKit< T >, stormm::topology::ValenceKit< T >
• infr14_param_idx : stormm::chemistry::ValenceKit< T >, stormm::energy::ValenceKit< T >, stormm::mm::ValenceKit< T >, stormm::restraints::ValenceKit< T >, stormm::review::ValenceKit< T >, stormm::structure::ValenceKit< T >, stormm::synthesis::ValenceKit< T >, stormm::topology::ValenceKit< T >
• init_evolution : stormm::energy::ThermostatWriter< T >, stormm::mm::ThermostatReader< T >, stormm::mm::ThermostatWriter< T >, stormm::trajectory::ThermostatReader< T >, stormm::trajectory::ThermostatWriter< T >
• init_temperature : stormm::energy::ThermostatWriter< T >, stormm::mm::ThermostatReader< T >, stormm::mm::ThermostatWriter< T >, stormm::trajectory::ThermostatReader< T >, stormm::trajectory::ThermostatWriter< T >
• init_temperatures : stormm::energy::ThermostatWriter< T >, stormm::mm::ThermostatReader< T >, stormm::mm::ThermostatWriter< T >, stormm::trajectory::ThermostatReader< T >, stormm::trajectory::ThermostatWriter< T >
• initial_step : stormm::energy::MMControlKit< T >, stormm::mm::MMControlKit< T >, stormm::stmath::MMControlKit< T >, stormm::trajectory::MMControlKit< T >
• initialize() : stormm::energy::ImplicitSolventWorkspace, stormm::energy::PMIGrid, stormm::energy::ScoreCard, stormm::mm::ImplicitSolventWorkspace, stormm::mm::ScoreCard, stormm::reporting::ProgressBar, stormm::review::ScoreCard, stormm::structure::ScoreCard, stormm::synthesis::ImplicitSolventWorkspace, stormm::synthesis::ScoreCard
• initializeForces() : stormm::chemistry::PhaseSpace, stormm::chemistry::PhaseSpaceSynthesis, stormm::diskutil::PhaseSpace, stormm::diskutil::PhaseSpaceSynthesis, stormm::energy::CellGrid< T, Tacc, Tcalc, T4 >, stormm::energy::PhaseSpace, stormm::energy::PhaseSpaceSynthesis, stormm::mm::CellGrid< T, Tacc, Tcalc, T4 >, stormm::mm::PhaseSpace, stormm::mm::PhaseSpaceSynthesis, stormm::namelist::PhaseSpace, stormm::review::PhaseSpaceSynthesis, stormm::stmath::PhaseSpace, stormm::stmath::PhaseSpaceSynthesis, stormm::structure::PhaseSpace, stormm::structure::PhaseSpaceSynthesis, stormm::synthesis::PhaseSpace, stormm::synthesis::PhaseSpaceSynthesis, stormm::testing::PhaseSpace, stormm::testing::PhaseSpaceSynthesis, stormm::trajectory::CellGrid< T, Tacc, Tcalc, T4 >, stormm::trajectory::PhaseSpace, stormm::trajectory::PhaseSpaceSynthesis
• initializeRandomStates() : stormm::energy::Thermostat, stormm::mm::Thermostat, stormm::trajectory::Thermostat
• inrt : stormm::trajectory::MotionSweepReader, stormm::trajectory::MotionSweepWriter
• inrt_nxt : stormm::trajectory::MotionSweepReader, stormm::trajectory::MotionSweepWriter
• inrt_nxt_ovrf : stormm::trajectory::MotionSweepReader, stormm::trajectory::MotionSweepWriter
• inrt_ovrf : stormm::trajectory::MotionSweepReader, stormm::trajectory::MotionSweepWriter
• inrt_scale : stormm::trajectory::MotionSweepReader, stormm::trajectory::MotionSweepWriter
• instantaneous_accumulators : stormm::energy::ScoreCardReader, stormm::energy::ScoreCardWriter, stormm::mm::ScoreCardWriter
• int_id : stormm::trajectory::ValidCoordinateTypes
• interpolateBySquaredValue() : stormm::energy::LogScaleSpline< T4 >, stormm::stmath::LogScaleSpline< T4 >
• interpolateByValue() : stormm::energy::LogScaleSpline< T4 >, stormm::stmath::LogScaleSpline< T4 >
• inv_fp_scale : stormm::energy::ISWorkspaceKit< T >, stormm::mm::ISWorkspaceKit< T >, stormm::synthesis::ISWorkspaceKit< T >
• inv_fp_scaling : stormm::stmath::GenericRdSubstrate< T >
• inv_frc_scale : stormm::chemistry::PsSynthesisReader, stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::energy::PsSynthesisReader, stormm::energy::PsSynthesisWriter, stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::mm::PsSynthesisReader, stormm::mm::PsSynthesisWriter, stormm::stmath::ConjGradSubstrate, stormm::stmath::PsSynthesisWriter, stormm::structure::PsSynthesisReader, stormm::structure::PsSynthesisWriter, stormm::synthesis::PsSynthesisReader, stormm::synthesis::PsSynthesisWriter, stormm::testing::PsSynthesisWriter, stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::trajectory::PsSynthesisReader, stormm::trajectory::PsSynthesisWriter
• inv_gpos_scale : stormm::chemistry::CoordinateSeriesReader< T >, stormm::chemistry::PsSynthesisReader, stormm::energy::CoordinateSeriesReader< T >, stormm::energy::CoordinateSeriesWriter< T >, stormm::energy::PsSynthesisReader, stormm::energy::PsSynthesisWriter, stormm::mm::PsSynthesisReader, stormm::mm::PsSynthesisWriter, stormm::review::CoordinateSeriesReader< T >, stormm::stmath::PsSynthesisWriter, stormm::structure::CoordinateSeriesReader< T >, stormm::structure::CoordinateSeriesWriter< T >, stormm::structure::PsSynthesisReader, stormm::structure::PsSynthesisWriter, stormm::synthesis::CoordinateSeriesReader< T >, stormm::synthesis::CoordinateSeriesWriter< T >, stormm::synthesis::PsSynthesisReader, stormm::synthesis::PsSynthesisWriter, stormm::testing::CoordinateSeriesWriter< T >, stormm::testing::PsSynthesisWriter, stormm::trajectory::CoordinateSeriesReader< T >, stormm::trajectory::CoordinateSeriesWriter< T >, stormm::trajectory::PsSynthesisReader, stormm::trajectory::PsSynthesisWriter
• inv_grp_atoms : stormm::synthesis::SyPermutorKit< T >
• inv_grp_bounds : stormm::synthesis::SyPermutorKit< T >
• inv_lpos_scale : stormm::energy::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::energy::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridReader< T, Tacc, Tcalc, T4 >, stormm::mm::CellGridWriter< T, Tacc, Tcalc, T4 >, stormm::trajectory::CellGridReader< T, Tacc, Tcalc, T4 >
• inv_masses : stormm::chemistry::ChemicalDetailsKit, stormm::energy::ChemicalDetailsKit, stormm::energy::SyAtomUpdateKit< T, T2, T4 >, stormm::mm::ChemicalDetailsKit, stormm::mm::SyAtomUpdateKit< T, T2, T4 >, stormm::restraints::ChemicalDetailsKit, stormm::review::ChemicalDetailsKit, stormm::structure::ChemicalDetailsKit, stormm::structure::SyAtomUpdateKit< T, T2, T4 >, stormm::synthesis::ChemicalDetailsKit, stormm::synthesis::SyAtomUpdateKit< T, T2, T4 >, stormm::topology::ChemicalDetailsKit, stormm::trajectory::ChemicalDetailsKit, stormm::trajectory::SyAtomUpdateKit< T, T2, T4 >
• inv_scale : stormm::review::MeshParamKit, stormm::structure::MeshParamKit
• inv_scale_f : stormm::review::MeshParamKit, stormm::structure::MeshParamKit
• inv_vel_scale : stormm::chemistry::PsSynthesisReader, stormm::energy::PsSynthesisReader, stormm::energy::PsSynthesisWriter, stormm::mm::PsSynthesisReader, stormm::mm::PsSynthesisWriter, stormm::stmath::PsSynthesisWriter, stormm::structure::PsSynthesisReader, stormm::structure::PsSynthesisWriter, stormm::synthesis::PsSynthesisReader, stormm::synthesis::PsSynthesisWriter, stormm::testing::PsSynthesisWriter, stormm::trajectory::PsSynthesisReader, stormm::trajectory::PsSynthesisWriter
• inverse_nrg_scale_f : stormm::energy::ScoreCardReader, stormm::energy::ScoreCardWriter, stormm::mm::ScoreCardWriter
• inverse_nrg_scale_lf : stormm::energy::ScoreCardReader, stormm::energy::ScoreCardWriter, stormm::mm::ScoreCardWriter
• invertible_group_bounds : stormm::chemistry::ChemicalFeaturesReader, stormm::structure::ChemicalFeaturesReader
• invertible_groups : stormm::chemistry::ChemicalFeaturesReader, stormm::structure::ChemicalFeaturesReader
• invoke() : stormm::display::NamelistToken, stormm::namelist::NamelistToken
• invu : stormm::chemistry::CondensateReader, stormm::chemistry::CoordinateFrameReader, stormm::chemistry::CoordinateSeriesReader< T >, stormm::chemistry::PhaseSpaceReader, stormm::chemistry::PsSynthesisReader, stormm::diskutil::CoordinateFrameReader, stormm::energy::CoordinateFrameReader, stormm::energy::CoordinateFrameWriter, stormm::energy::CoordinateSeriesReader< T >, stormm::energy::CoordinateSeriesWriter< T >, stormm::energy::PhaseSpaceReader, stormm::energy::PhaseSpaceWriter, stormm::energy::PsSynthesisBorders, stormm::energy::PsSynthesisReader, stormm::energy::PsSynthesisWriter, stormm::mm::CoordinateFrameReader, stormm::mm::PhaseSpaceReader, stormm::mm::PhaseSpaceWriter, stormm::mm::PsSynthesisReader, stormm::mm::PsSynthesisWriter, stormm::namelist::CoordinateFrameReader, stormm::restraints::CoordinateFrameReader, stormm::review::CoordinateFrameReader, stormm::review::CoordinateSeriesReader< T >, stormm::review::MeshParamKit, stormm::stmath::PsSynthesisWriter, stormm::structure::CondensateReader, stormm::structure::CondensateWriter, stormm::structure::CoordinateFrameReader, stormm::structure::CoordinateFrameWriter, stormm::structure::CoordinateSeriesReader< T >, stormm::structure::CoordinateSeriesWriter< T >, stormm::structure::MeshParamKit, stormm::structure::PhaseSpaceReader, stormm::structure::PhaseSpaceWriter, stormm::structure::PsSynthesisReader, stormm::structure::PsSynthesisWriter, stormm::synthesis::CondensateReader, stormm::synthesis::CondensateWriter, stormm::synthesis::CoordinateFrameReader, stormm::synthesis::CoordinateFrameWriter, stormm::synthesis::CoordinateSeriesReader< T >, stormm::synthesis::CoordinateSeriesWriter< T >, stormm::synthesis::PhaseSpaceReader, stormm::synthesis::PhaseSpaceWriter, stormm::synthesis::PsSynthesisBorders, stormm::synthesis::PsSynthesisReader, stormm::synthesis::PsSynthesisWriter, stormm::testing::CoordinateSeriesWriter< T >, stormm::testing::PsSynthesisWriter, stormm::trajectory::CondensateReader, stormm::trajectory::CondensateWriter, stormm::trajectory::CoordinateFrameReader, stormm::trajectory::CoordinateFrameWriter, stormm::trajectory::CoordinateSeriesReader< T >, stormm::trajectory::CoordinateSeriesWriter< T >, stormm::trajectory::PhaseSpaceReader, stormm::trajectory::PhaseSpaceWriter, stormm::trajectory::PsSynthesisBorders, stormm::trajectory::PsSynthesisReader, stormm::trajectory::PsSynthesisWriter
• invu_alt : stormm::chemistry::PhaseSpaceReader, stormm::chemistry::PsSynthesisReader, stormm::energy::PhaseSpaceReader, stormm::energy::PhaseSpaceWriter, stormm::energy::PsSynthesisReader, stormm::energy::PsSynthesisWriter, stormm::mm::PhaseSpaceReader, stormm::mm::PhaseSpaceWriter, stormm::mm::PsSynthesisReader, stormm::mm::PsSynthesisWriter, stormm::stmath::PsSynthesisWriter, stormm::structure::PhaseSpaceReader, stormm::structure::PhaseSpaceWriter, stormm::structure::PsSynthesisReader, stormm::structure::PsSynthesisWriter, stormm::synthesis::PhaseSpaceReader, stormm::synthesis::PhaseSpaceWriter, stormm::synthesis::PsSynthesisReader, stormm::synthesis::PsSynthesisWriter, stormm::testing::PsSynthesisWriter, stormm::trajectory::PhaseSpaceReader, stormm::trajectory::PhaseSpaceWriter, stormm::trajectory::PsSynthesisReader, stormm::trajectory::PsSynthesisWriter
• isAtomInMask() : stormm::chemistry::AtomMask, stormm::namelist::AtomMask, stormm::restraints::AtomMask, stormm::structure::AtomMask
• isCommandLineContent() : stormm::display::NamelistEmulator, stormm::namelist::NamelistEmulator, stormm::testing::NamelistEmulator
• IsomerPlan() : stormm::chemistry::IsomerPlan, stormm::structure::IsomerPlan, stormm::synthesis::IsomerPlan
• isSubsection() : stormm::review::SectionContents
• ISWorkspaceKit() : stormm::energy::ISWorkspaceKit< T >, stormm::mm::ISWorkspaceKit< T >, stormm::synthesis::ISWorkspaceKit< T >
• isWorkTimeNow() : stormm::namelist::NiceControls