stormm::structure::SystemCache Member List
This is the complete list of members for stormm::structure::SystemCache, including all inherited members.
| exportCoordinateSynthesis(int globalpos_scale_bits=default_globalpos_scale_bits, int velocity_scale_bits=default_velocity_scale_bits, int force_scale_bits=default_force_scale_bits) const | stormm::structure::SystemCache | |
| exportTopologySynthesis(const GpuDetails &gpu=null_gpu, const ExceptionResponse policy=ExceptionResponse::DIE) const | stormm::structure::SystemCache | |
| getCheckpointKind(const int system_index) const | stormm::structure::SystemCache | |
| getCheckpointKind(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointKind(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointKind(const AtomGraph *query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointKind(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointKind(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointName(int system_index) const | stormm::structure::SystemCache | |
| getCheckpointName(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointName(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointName(const AtomGraph *query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointName(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCheckpointName(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCoordinatePointer(int index) const | stormm::structure::SystemCache | |
| getCoordinatePointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCoordinatePointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCoordinatePointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getCoordinates(int index) const | stormm::structure::SystemCache | |
| getCoordinates() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getFeatures(int index) const | stormm::structure::SystemCache | |
| getFeaturesPointer(int index) const | stormm::structure::SystemCache | |
| getFeaturesPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getFeaturesPointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getFeaturesPointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getFirstMatchingSystemIndex(const AtomGraph *query_ag, ExceptionResponse xcpt=ExceptionResponse::DIE) const | stormm::structure::SystemCache | |
| getFirstMatchingSystemIndex(const std::string &query_label, ExceptionResponse xcpt=ExceptionResponse::DIE) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getFirstMatchingSystemIndex(const AtomGraph *query_ag, const std::string &query_label, ExceptionResponse xcpt=ExceptionResponse::DIE) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const int system_index) const | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const AtomGraph *query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesKind(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getInputCoordinatesName(int system_index) const | stormm::structure::SystemCache | |
| getLabel(int label_index) const | stormm::structure::SystemCache | |
| getLabelCacheIndex(const std::string &query) const | stormm::structure::SystemCache | |
| getLabelCount() const | stormm::structure::SystemCache | |
| getLabelsMatchingTopology(const AtomGraph *query_ag) const | stormm::structure::SystemCache | |
| getLabelsMatchingTopology(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getMatchingSystemIndices(const AtomGraph *query_ag, const std::string &query_label) const | stormm::structure::SystemCache | |
| getMatchingSystemIndices(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getMatchingSystemIndices(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getMatchingSystemIndices(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getMatchingSystemIndices(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getPrintingProtocol() const | stormm::structure::SystemCache | |
| getPrintingProtocol(CoordinateFileRole purpose, int system_index) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getRestraintCount() const | stormm::structure::SystemCache | |
| getRestraintPointer(int index) const | stormm::structure::SystemCache | |
| getRestraintPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getRestraintPointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getRestraintPointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getRestraints(int index) const | stormm::structure::SystemCache | |
| getSelfPointer() const | stormm::structure::SystemCache | |
| getStructureDataEntry(int index) const | stormm::structure::SystemCache | |
| getStructureDataEntry() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getStructureDataEntryPointer(int index) const | stormm::structure::SystemCache | |
| getStructureDataEntryPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getStructureDataEntryPointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getStructureDataEntryPointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemCount() const | stormm::structure::SystemCache | |
| getSystemExampleIndex(int topology_index) const | stormm::structure::SystemCache | |
| getSystemForwardMask(int index) const | stormm::structure::SystemCache | |
| getSystemForwardMaskPointer(int index) const | stormm::structure::SystemCache | |
| getSystemForwardMaskPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemLabel(int system_index) const | stormm::structure::SystemCache | |
| getSystemLabelIndex(int system_index) const | stormm::structure::SystemCache | |
| getSystemStaticMask(int index) const | stormm::structure::SystemCache | |
| getSystemStaticMaskPointer(int index) const | stormm::structure::SystemCache | |
| getSystemStaticMaskPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemTopology(int index) const | stormm::structure::SystemCache | |
| getSystemTopologyIndex(int coord_index) const | stormm::structure::SystemCache | |
| getSystemTopologyIndex() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemTopologyPointer(int index) const | stormm::structure::SystemCache | |
| getSystemTopologyPointer(int index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemTopologyPointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getSystemTopologyPointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTopologicalCases(int topology_index) const | stormm::structure::SystemCache | |
| getTopologiesMatchingLabel(const std::string &query_label) const | stormm::structure::SystemCache | |
| getTopologiesMatchingLabel(const std::string &query_label) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTopology(int topology_index) const | stormm::structure::SystemCache | |
| getTopologyCacheIndex(const AtomGraph *ag) const | stormm::structure::SystemCache | |
| getTopologyCacheIndex(const AtomGraph &ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTopologyCaseCount(int topology_index) const | stormm::structure::SystemCache | |
| getTopologyCount() const | stormm::structure::SystemCache | |
| getTopologyPointer(int topology_index) const | stormm::structure::SystemCache | |
| getTopologyPointer(int topology_index) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTopologyPointer() const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTopologyPointer() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryFusionProtocol() const | stormm::structure::SystemCache | |
| getTrajectoryKind(const int system_index) const | stormm::structure::SystemCache | |
| getTrajectoryKind(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryKind(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryKind(const AtomGraph *query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryKind(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryKind(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryName(int system_index) const | stormm::structure::SystemCache | |
| getTrajectoryName(const AtomGraph *query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryName(const AtomGraph &query_ag) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryName(const AtomGraph *query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryName(const AtomGraph &query_ag, const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getTrajectoryName(const std::string &query_label) const (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| getUniqueStaticMaskPointers() const | stormm::structure::SystemCache | |
| getUniqueStaticMaskPointers() (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| operator=(const SystemCache &other)=default (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| operator=(SystemCache &&other)=default (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| setPrintingProtocol(const PrintSituation expectation_in) | stormm::structure::SystemCache | |
| setTrajectoryFusionProtocol(TrajectoryFusion file_merger_protocol_in) | stormm::structure::SystemCache | |
| SystemCache(ExceptionResponse policy_in=ExceptionResponse::DIE, MapRotatableGroups map_chemfe_rotators=MapRotatableGroups::NO, PrintSituation expectation_in=PrintSituation::OPEN_NEW) | stormm::structure::SystemCache | |
| SystemCache(const FilesControls &fcon, const std::vector< RestraintControls > &rstcon, const DynamicsControls &dyncon, ExceptionResponse policy_in=ExceptionResponse::DIE, MapRotatableGroups map_chemfe_rotators=MapRotatableGroups::NO, PrintSituation expectation_in=PrintSituation::OPEN_NEW, StopWatch *timer_in=nullptr) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| SystemCache(const FilesControls &fcon, const DynamicsControls &dyncon, ExceptionResponse policy_in=ExceptionResponse::DIE, MapRotatableGroups map_chemfe_rotators=MapRotatableGroups::NO, PrintSituation expectation_in=PrintSituation::OPEN_NEW, StopWatch *timer_in=nullptr) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| SystemCache(const FilesControls &fcon, ExceptionResponse policy_in=ExceptionResponse::DIE, MapRotatableGroups map_chemfe_rotators=MapRotatableGroups::NO, PrintSituation expectation_in=PrintSituation::OPEN_NEW, StopWatch *timer_in=nullptr) (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache | |
| SystemCache(const SystemCache &original)=default | stormm::structure::SystemCache | |
| SystemCache(SystemCache &&original)=default (defined in stormm::structure::SystemCache) | stormm::structure::SystemCache |
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