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STORMM Source Documentation
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This is the complete list of members for stormm::structure::RMSDPlan, including all inherited members.
| addSystemCache(const SystemCache *sc, const SynthesisCacheMap *scmap) | stormm::structure::RMSDPlan | |
| addSystemCache(const SystemCache &sc, const SynthesisCacheMap &scmap) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| dpData(HybridTargetLevel tier=HybridTargetLevel::HOST) const | stormm::structure::RMSDPlan | |
| getAlignmentProtocol(int plan_index) const | stormm::structure::RMSDPlan | |
| getCachePointer() const | stormm::structure::RMSDPlan | |
| getCoordinateSynthesisPointer() const | stormm::structure::RMSDPlan | |
| getGeneralStrategy() const | stormm::structure::RMSDPlan | |
| getPlanCount() const | stormm::structure::RMSDPlan | |
| getPlanIndex(int index, SystemGrouping organization) const | stormm::structure::RMSDPlan | |
| getRequiredMassFraction() const | stormm::structure::RMSDPlan | |
| getSynthesisMapPointer() const | stormm::structure::RMSDPlan | |
| getTopologyPointer(int plan_index) const | stormm::structure::RMSDPlan | |
| operator=(const RMSDPlan &original)=default (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| operator=(RMSDPlan &&original)=default (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const PhaseSpaceSynthesis *poly_ps_in=nullptr, const SystemCache *sc_in=nullptr, const SynthesisCacheMap *scmap_in=nullptr) | stormm::structure::RMSDPlan | |
| RMSDPlan(const AtomGraph &ag_in, const CoordinateFrame &cf_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu, int low_mol_idx=0, int high_mol_idx=-1) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const AtomEquivalence &eq_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis *poly_ps_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu, int low_mol_idx=0, int high_mol_idx=-1) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis *poly_ps_in, const std::vector< AtomEquivalence > &eq_list_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis &poly_ps_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu, int low_mol_idx=0, int high_mol_idx=-1) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis &poly_ps_in, const std::vector< AtomEquivalence > &eq_list_in, RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis *poly_ps_in, const SystemCache *sc_in, const SynthesisCacheMap *scmap_in, const RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, const double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu, const int low_mol_idx=0, const int high_mol_idx=-1) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const PhaseSpaceSynthesis &poly_ps_in, const SystemCache &sc_in, const SynthesisCacheMap &scmap_in, const RMSDMethod strategy_in=RMSDMethod::ALIGN_MASS, const double rmf_in=default_required_mass_fraction, const GpuDetails &gpu=null_gpu, const int low_mol_idx=0, const int high_mol_idx=-1) (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| RMSDPlan(const RMSDPlan &original)=default | stormm::structure::RMSDPlan | |
| RMSDPlan(RMSDPlan &&original)=default (defined in stormm::structure::RMSDPlan) | stormm::structure::RMSDPlan | |
| spData(HybridTargetLevel tier=HybridTargetLevel::HOST) const | stormm::structure::RMSDPlan |