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stormm::review::BackgroundMesh< T > Member List

This is the complete list of members for stormm::review::BackgroundMesh< T >, including all inherited members.

BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const MeshParameters &measurements_in=MeshParameters(), const PrecisionModel build_precision_in=PrecisionModel::SINGLE)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const MeshParameters &measurements_in=MeshParameters(), const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const MeshParameters &measurements_in=MeshParameters(), const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph *ag_in, const CoordinateFrame *cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateFrame &cf_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const MeshParameters &measurements_in=MeshParameters(), int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, double probe_radius_in, double well_depth_in, VdwCombiningRule mixing_protocol_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={}, double clash_distance_in=default_mesh_elec_damping_range, double clash_ratio_in=default_mesh_vdw_damping_ratio, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, NonbondedPotential field_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, double clash_distance_in=default_mesh_elec_damping_range, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, double spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, double buffer, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(GridDetail kind_in, double probe_radius_in, const AtomGraph &ag_in, const CoordinateSeries< Tcoord > &cs_in, const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=default_globalpos_scale_bits, int averaging_order=default_mesh_density_averaging_order, const std::vector< double > &probe_sigma={}, PrecisionModel prec=PrecisionModel::SINGLE, const MeshKlManager &launcher=MeshKlManager(), HybridTargetLevel availability=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
BackgroundMesh(const BackgroundMesh< T > &original)=defaultstormm::review::BackgroundMesh< T >
BackgroundMesh(BackgroundMesh< T > &&original)=default (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
computeField(const MeshKlManager &launcher=MeshKlManager(), PrecisionModel prec=PrecisionModel::SINGLE, HybridTargetLevel availability=HybridTargetLevel::HOST, const std::vector< double > &probe_sigma={}, const std::vector< double > &probe_epsilon={})stormm::review::BackgroundMesh< T >
data(HybridTargetLevel tier=HybridTargetLevel::HOST) conststormm::review::BackgroundMesh< T >
data(HybridTargetLevel tier=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
getBuildPrecision() conststormm::review::BackgroundMesh< T >
getClashDistance() conststormm::review::BackgroundMesh< T >
getClashRatio() conststormm::review::BackgroundMesh< T >
getCoefficientScalingBits() conststormm::review::BackgroundMesh< T >
getCoefficientScalingFactor() conststormm::review::BackgroundMesh< T >
getCombiningRule() conststormm::review::BackgroundMesh< T >
getCoordinatePointer() conststormm::review::BackgroundMesh< T >
getDimensions() conststormm::review::BackgroundMesh< T >
getEnsemblePointer() conststormm::review::BackgroundMesh< T >
getEnsembleTypeCode() conststormm::review::BackgroundMesh< T >
getMeshKind() conststormm::review::BackgroundMesh< T >
getMolecularBasis() conststormm::review::BackgroundMesh< T >
getMolecularBasis() (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
getNonbondedKit(HybridTargetLevel tier=HybridTargetLevel::HOST) conststormm::review::BackgroundMesh< T >
getNonbondedPotential() conststormm::review::BackgroundMesh< T >
getOcclusionPenalty() conststormm::review::BackgroundMesh< T >
getProbeRadius() conststormm::review::BackgroundMesh< T >
getReferenceNonbondedKit(HybridTargetLevel tier=HybridTargetLevel::HOST) conststormm::review::BackgroundMesh< T >
getTopologyPointer() conststormm::review::BackgroundMesh< T >
getWellDepth() conststormm::review::BackgroundMesh< T >
operator=(const BackgroundMesh< T > &original)=default (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
operator=(BackgroundMesh< T > &&original)=default (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setCoefficientScalingBits(int scaling_bits_in)stormm::review::BackgroundMesh< T >
setMeshParameters(const AtomGraph *ag_in, const CoordinateFrame *cf_in, double padding, double spacing, int scale_bits_in=-100)stormm::review::BackgroundMesh< T >
setMeshParameters(const AtomGraph *ag_in, const CoordinateFrame *cf_in, double padding, const std::vector< double > &spacing, int scale_bits_in=-100) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setMeshParameters(double padding, double spacing, int scale_bits_in=-100) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setMeshParameters(double padding, const std::vector< double > &spacing, int scale_bits_in=-100) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setMeshParameters(const std::vector< double > &mesh_bounds, double spacing, int scale_bits_in=-100) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setMeshParameters(const std::vector< double > &mesh_bounds, const std::vector< double > &spacing, int scale_bits_in=-100) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
setOcclusionPenalty(double occlusion_penalty_in)stormm::review::BackgroundMesh< T >
setProbeRadius(double probe_radius_in)stormm::review::BackgroundMesh< T >
setWellDepth(double well_depth_in)stormm::review::BackgroundMesh< T >
templateFreeData(HybridTargetLevel tier=HybridTargetLevel::HOST) conststormm::review::BackgroundMesh< T >
templateFreeData(HybridTargetLevel tier=HybridTargetLevel::HOST) (defined in stormm::review::BackgroundMesh< T >)stormm::review::BackgroundMesh< T >
templateFreeNonbondedKit(HybridTargetLevel tier=HybridTargetLevel::HOST) conststormm::review::BackgroundMesh< T >
validateCombiningRule(VdwCombiningRule mixing_protocol_in, const std::vector< double > &probe_sigma, const std::vector< double > &probe_epsilon)stormm::review::BackgroundMesh< T >
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