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STORMM Source Documentation
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This is the complete list of members for stormm::restraints::AtomMask, including all inherited members.
| addAtoms(const std::vector< int > &new_indices, ExceptionResponse policy=ExceptionResponse::DIE) | stormm::restraints::AtomMask | |
| addAtoms(const std::vector< char4 > &new_names) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| addAtoms(const AtomMask &new_mask, const CoordinateFrame &cf, const ChemicalFeatures &chemfe) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| addAtoms(const std::string &new_mask, const CoordinateFrame &cf, const ChemicalFeatures &chemfe) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| addAtoms(const AtomMask &new_mask, const CoordinateFrame &cf) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| addAtoms(const std::string &new_mask, const CoordinateFrame &cf) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| AtomMask(const AtomGraph *ag_in=nullptr) | stormm::restraints::AtomMask | |
| AtomMask(const std::string &input_text_in, const AtomGraph *ag_in, const ChemicalFeatures &chemfe, const CoordinateFrameReader &cfr, MaskInputMode mode=MaskInputMode::AMBMASK, const std::string &description_in=std::string("No description provided")) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| AtomMask(const std::string &input_text_in, const AtomGraph *ag_in, const ChemicalFeatures &chemfe, const CoordinateFrame &cf, MaskInputMode mode=MaskInputMode::AMBMASK, const std::string &description_in=std::string("No description provided")) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| AtomMask(const std::string &input_text_in, const AtomGraph *ag_in, const ChemicalFeatures &chemfe, const PhaseSpace &ps, MaskInputMode mode=MaskInputMode::AMBMASK, const std::string &description_in=std::string("No description provided")) (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| AtomMask(const AtomMask &original)=default | stormm::restraints::AtomMask | |
| AtomMask(AtomMask &&original)=default (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| getDescription() const | stormm::restraints::AtomMask | |
| getInputKind() const | stormm::restraints::AtomMask | |
| getInputText() const | stormm::restraints::AtomMask | |
| getMask() const | stormm::restraints::AtomMask | |
| getMaskedAtomCount() const | stormm::restraints::AtomMask | |
| getMaskedAtomList() const (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| getRawMask() const | stormm::restraints::AtomMask | |
| getRecommendation() const | stormm::restraints::AtomMask | |
| getSegments() const | stormm::restraints::AtomMask | |
| getTopologyPointer() const | stormm::restraints::AtomMask | |
| isAtomInMask(const char4 atom_name) const | stormm::restraints::AtomMask | |
| isAtomInMask(const char4 res_name, const char4 atom_name) const (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask | |
| isAtomInMask(int atom_index) const (defined in stormm::restraints::AtomMask) | stormm::restraints::AtomMask |